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= Welcome to the High Performance Computing Cluster BIOcrunch Wiki at the ZSM =
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= Welcome to the HPC Cluster ''BioCrunch'' Wiki =
  
 
[[File:biochrunch.PNG]]
 
[[File:biochrunch.PNG]]
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== Introduction ==
 
== Introduction ==
  
The BIOCrunch cluster at ZSM is a centrally administered cluster containing several nodes hosted by the Zoologische Staatssammlung in Munich, Germany.
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The BioCrunch cluster is a centrally administered cluster consisting of several nodes hosted by the [http://www.zsm.mwn.de Zoologische Staatssammlung] in Munich, Germany.
  
The cluster runs 64-bit Linux and is accessible at cluster.zsm-intra.net to users with accounts. [[BIOcrunch:About|Here]] you find the list of installed software.
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The cluster [[BIOcrunch:About|hosts several programms ]] that are dedicated to the inference of phylogenetic trees.  
  
Send emails to administrator@zsm.mwn.de if you have a technical question or problem that cannot be addressed by the documentation below.
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BIOcrunch runs a 64-bit Linux system and is only accessible for users with accounts.  
  
== Basics ==
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== How to prepare and run a job ==
  
* How to [[Get Account|get an account]] ?
 
 
* What are my [[responsibilities]]?
 
* What are my [[responsibilities]]?
* How to [[login]]?
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* [[Get Account|How to get an account]]
* How to do file transfers [[File Transfers]]?
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* [[PrepareJob|Preparing the job on your local machine]]
* How to observe the [http://cluster.zsm-intra.net/ganglia/ Cluster Status]
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* [[File Transfers|Copying job files to the cluster]]
 
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* [[Login|Log in to the cluster]]
== How to's ==
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* [[Qsub|Starting the job]]
 
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* Check the status of your job under [http://cluster.zsm-intra.net/ganglia/ Cluster Status]
* [[Get Account|Get an account]]
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* [[PrepareJob|Prepare the job on your local machine]]
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* [[File Transfers|Copy the job files to the cluster]]
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* [[Login|Log on to the cluster]]
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* [[Qsub|Start the job]]
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* Wait for the job to finish
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* [[File Transfers|Get the results]]
 
* [[File Transfers|Get the results]]
  

Latest revision as of 15:46, 24 May 2017

[edit] Welcome to the HPC Cluster BioCrunch Wiki

Biochrunch.PNG

[edit] Introduction

The BioCrunch cluster is a centrally administered cluster consisting of several nodes hosted by the Zoologische Staatssammlung in Munich, Germany.

The cluster hosts several programms that are dedicated to the inference of phylogenetic trees.

BIOcrunch runs a 64-bit Linux system and is only accessible for users with accounts.

[edit] How to prepare and run a job


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