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'''MediaWiki wurde erfolgreich installiert.'''
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= Welcome to the HPC Cluster ''BioCrunch'' Wiki =
  
Hilfe zur Benutzung und Konfiguration der Wiki-Software findest du im [http://meta.wikimedia.org/wiki/Help:Contents Benutzerhandbuch].
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[[File:biochrunch.PNG]]
  
== Starthilfen ==
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== Introduction ==
  
Liebe BIOcrunch User,
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The BioCrunch cluster is a centrally administered cluster consisting of several nodes hosted by the [http://www.zsm.mwn.de Zoologische Staatssammlung] in Munich, Germany.
  
in diesem Wiki werden die einzelnen Programme kurz beschrieben, sowie einige todo's für Linux-beginners :)
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The cluster [[BIOcrunch:About|hosts several programms ]] that are dedicated to the inference of phylogenetic trees.
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BIOcrunch runs a 64-bit Linux system and is only accessible for users with accounts.
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== How to prepare and run a job ==
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* What are my [[responsibilities]]?
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* [[Get Account|How to get an account]]
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* [[PrepareJob|Preparing the job on your local machine]]
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* [[File Transfers|Copying job files to the cluster]]
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* [[Login|Log in to the cluster]]
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* [[Qsub|Starting the job]]
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* Check the status of your job under [http://cluster.zsm-intra.net/ganglia/ Cluster Status]
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* [[File Transfers|Get the results]]
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<!--
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== Executables and Libraries ==
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Can you install programs for me ?
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Where is python 2.5 ?
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Information on Libraries and Interfaces installed on the cluster.
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== Other ==
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BIOCrunchC GPU computing
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How to check if my program is using threads
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Please Contact administrator@zsm.mwn.de for problems,requests,etc...
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== Best practices ==
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Our aim is to publish best practices and experiences about research and cluster computing.
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What is a "project"?
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Software development
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Data collection
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Data processing
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== Technical/administration information ==
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This section is for documenting the technical and administration side of BIOCrunch.
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BIOCrunch's blueprint?
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How to add a user?
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How to add a node?
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How to add a file server?
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rocks sync config hangs!
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Configuration of master node
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Configuration of gridengine
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How to install different compilers?
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Syslog Notes
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Monitoring Issues - to be resolved eventually
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Unpacking Nodes
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Software tips, tricks, howtos
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Hardware tips, tricks, howtos
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Testing ground
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Gerhard W. Recher / Matthias Müller
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-->
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__NOTOC__

Latest revision as of 15:46, 24 May 2017

[edit] Welcome to the HPC Cluster BioCrunch Wiki

Biochrunch.PNG

[edit] Introduction

The BioCrunch cluster is a centrally administered cluster consisting of several nodes hosted by the Zoologische Staatssammlung in Munich, Germany.

The cluster hosts several programms that are dedicated to the inference of phylogenetic trees.

BIOcrunch runs a 64-bit Linux system and is only accessible for users with accounts.

[edit] How to prepare and run a job


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